other:Article Title: AAVs targeting human carbonic anhydrase IV enhance gene delivery to the brain.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies NeuN Invitrogen Cat# MA5-33103; RRID: AB_2802653 SOX9 abcam Cat# ab185966; RRID: AB_2728660 ERG Invitrogen Cat# MA5-32036; RRID: AB_2809330 anti-human CA-IV antibody Thermo Fisher Scientific Cat# 13931-1-AP; RRID: AB_2877990 anti-GFP antibody Aves Labs Cat# GFP-1020; RRID: AB_10000240 SOX2 Thermo Fisher Scientific Cat# 14-9811-82; RRID; AB_11219471 Chemicals, peptides, and recombinant proteins Human CA-IV This paper N/A Mouse CA-IV This paper N/A Mouse LY6A This paper N/A Critical commercial assays VirusGEN AAV Kit Mirus Bio Cat# MIR 8007 2X ddPCR EvaGreen Supermix Bio-Rad 186-4034 Quick-DNA/RNA viral kit Zymo Research Cat# D7021 Dual Index primers NEB NEBNext Multiplex Oligos for Illumina Maxima H Minus cDNA Synthesis Master Mix Thermo Fisher Scientific Cat# M1662 TRIzol reagent and the Phasemaker System Thermo Fisher Scientific A33251 Deposited data Next-generation sequencing datasets of AAV selection This paper Sequence Read Archive (Accession code: PRJNA1301436) Experimental models: Cell lines AAV-MAX suspension cells Thermo Fisher Scientific Cat# A51217 HEK293T ATCC Cat# CRL-3216 Expi293 Thermo Fisher Scientific A14635 Experimental models: Organisms/strains C57BL/6J The Jackson Laboratory (JAX) 000664 CBA/J The Jackson Laboratory (JAX) 000656 non-obese diabetic (NOD)/ShiLtJ The Jackson Laboratory (JAX) 001976 human cortical brain organoids This paper N/A Recombinant DNA pUCmini-iCAP-Alpha 49 This paper Addgene: 244910 pUCmini-iCAP-hCA4-IV77 This paper Addgene: 244907 pUCmini-iCAP-hCA4-IV68 This paper Addgene: 244906 pAAV-CAG-hCA4-miR122 This paper Addgene: 244908 pAAV-CAG-tdTomato-miR122 This paper Addgene: 244909 Software and algorithms Prism 10.2.0 GraphPad RRID:SCR_002798 Python Python Software Foundation RRID:SCR_008394; version 3.11 ImageJ (Fiji distribution) FIJI RRID:SCR_003070; version 2.9.0 PredGPI Bologna Biocomputing Group RRID:SCR_018363 QuantaSoft Bio-Rad RRID:SCR_025321, version 1.7.4 Nikon Elements Software Nikon RRID:SCR_014329, version 6.10.01 Code for analyzing capsid selections This paper GitHub (https://github.com/GradinaruLab/ in-vitro-transduction-assay) (Continued on next page) Cell Reports 44, 116419, November 25, 2025 15
Recombinant:Article Title: Differentiation in the human urothelia is defined by distinct alternative polyadenylation.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies MCK10/DDR1 Invitrogen MA5-37672; RRID: AB_2897596 DVL3 Invitrogen PA5-115148; RRID: AB_2899784 LYPD3 Invitrogen PA5-111138; RRID: AB_2856548 DAPI Invitrogen D1306 Anti-rabbit HRP Southern Biotech #4050-1 Anti-mouse HRP Southern Biotech #1010-05 Biological samples Human ureter This paper Ureter Chemicals, peptides, and recombinant proteins Lipofectamine 3000 Invitrogen L3000015 SE Cell Line 96-well Nucleofector Kit (960 RCT) Lonza Bioscience V4SC-1960 Critical commercial assays Dual-Luciferase® Reporter Assay System Promega E1960 TSA+Cy3 Detection Kit Akoya Biosciences NEL744001KT TSA+Cy5 Detection Kit Akoya Biosciences NEL745001KT RNAscope Multiplex Fluorescent Detection Reagents v2 ACDbio 323110 RNAscope H2O2 and Protease Plus Reagents ACDbio 322330 RNAscope Target Retrieval Reagents ACDbio 32000 RNAscope Wash Buffer Reagents ACDbio 310091 Xenium Slides & Sample Prep Reagents 10x Genomics 1000460 Xenium Decoding Consumables 10x Genomics 1000487 Xenium Decoding Reagents 10x Genomics 1000461 Xenium Stand Alone Gene Expression Panel 10x Genomics #8QH2R6 Xenium Cell Segmentation Add-on Kit 10x Genomics 1000662 Deposited data Ureter scRNA-seq data Fink et al.3 GEO: GSE184111 Urothelial cell gene and peak count matrices This paper GEO: GSE262863 Experimental models: Cell lines .. HEK293T ATCC CRL-3216 Recombinant DNA pmirGLO Dual-Luciferase miRNA Target Expression Vector Promega E1330 AKIRIN1-P1 This paper Addgene #236018 AKIRIN1-P2 This paper Addgene #236019 ALDH5A1-P1 This paper Addgene #236020 ALDH5A1-P2 This paper Addgene #236021 DNM1L-P1 This paper Addgene #236022 DNM1L-P2 This paper Addgene #236023 (Continued on next page) Cell Reports 45, 116839, January 27, 2026 13 .. REAGENT or RESOURCE SOURCE IDENTIFIER DNM1L-P3 This paper Addgene #236024 DVL3-P1 This paper Addgene #236025 DVL3-P2 This paper Addgene #236026 ESYT2-P1 This paper Addgene #236027 ESYT2-P2 This paper Addgene #236028 HRH1-P1 This paper Addgene #236029 HRH1-P2 This paper Addgene #236030 ITGB6-P1 This paper Addgene #236031 ITGB6-P3 This paper Addgene #236032 IVNS1ABP-P1 This paper Addgene #236301 IVNS1ABP-P2 This paper Addgene #236302 IVNS1ABP-P3 This paper Addgene #236303 NKIRAS2-P1 This paper Addgene #236304 NKIRAS2-P2 This paper Addgene #236305 NOL12-P1 This paper Addgene #236306 NOL12-P2 This paper Addgene #236307 PLEKHA2-P1 This paper Addgene #236308 PLEKHA2-P2 This paper Addgene #236309 PMF1-P1 This paper Addgene #236310 PMF1-P2 This paper Addgene #236311 PTK6-P1 This paper Addgene #236312 PTK6-P2 This paper Addgene #236313 PTK6-P3 This paper Addgene #236314 RPS6KA3-P1 This paper Addgene #236315 RPS6KA3-P3 This paper Addgene #236316 SPINT1-P1 This paper Addgene #236317 SPINT1-P2 This paper Addgene #236318 SPINT1-P3 This paper Addgene #236319 TCTA-P1 This paper Addgene #236320 TCTA-P2 This paper Addgene #236321 C4orf19-P1 This paper Addgene #236322 C4orf19-P2 This paper Addgene #236323 C6orf89-P1 This paper Addgene #236324 C6orf89-P2 This paper Addgene #236325 C6orf89-P3 This paper Addgene #236326 DDR1-P1 This paper Addgene #236327 DDR1-P2 This paper Addgene #236328 METTL3-P1 This paper Addgene #237825 METTL3-P2 This paper Addgene #237826 MFSD11-P1 This paper Addgene #237827 MFSD11-P2 This paper Addgene #237828 NABP1-P1 This paper Addgene #237829 NABP1-P2 This paper Addgene #237830 NABP1-P3 This paper Addgene #237831 NAGA-P1 This paper Addgene #237832 NAGA-P2 This paper Addgene #237833 NCOA7-P1 This paper Addgene #237834 NCOA7-P2 This paper Addgene #237835 OPTN-P1 This paper Addgene #237836 (Continued on next page) 14 Cell Reports 45, 116839, January 27, 2026
Article Title: Hunger modulates exploration through suppression of dopamine signaling in the tail of the striatum.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal anti-dsRed Takara RRID: AB_10013483; Cat. #632496 Chicken polyclonal anti-GFP Abcam RRID: AB_300798; Cat. #13970 Goat polyclonal anti-AgRP Thermofisher Scientific RRID: AB_2608453; Cat. #PA5-47831 Mouse anti-tyrosine hydroxylase Immunostar RRID: AB_572268; Cat. #22941 Bacterial and virus strains AAV9-CAG-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8mut This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-hSyn-mCherry Deisseroth Lab RRID: Addgene_114472; #114472-AAV8 AAV9-hSyn-DIO-hM3D(G)q-mCherry Addgene RRID: Addgene_44361; #44361-AAV9 AAV8-hSyn-DIO-hM4D(G)i-mCherry Addgene RRID: Addgene_44362; #44362-AAV8 AAV8-hSyn-DIO-mCherry Addgene RRID: Addgene_50459; #50459-AAV8 AAV8-hSyn-FLEX-TC66T-P2A-EGFP-P2A-N2CG This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-Ef1a-FLEX-TVA-EGFP Salk Institute 26198 pAAV-nEF-Con/Foff 2.0-ChRmine-oScarlet Addgene RRID: Addgene_137161; #137161 pAAV-hSyn-FLEX-10xmyc Capelli et al. 70 N/A pAAV-hSyn-FLEX-H2B-GFP Ruder et al. 71 N/A pAAV-CAG-Cre Yang et al. 72 N/A EnvA-pseudotyped CVS-N2C-RbV-ΔG-H2btdTomato Janelia Viral Core N/A Chemicals, peptides, and recombinant proteins Deschloroclozapine MedChem Express Cat. #HY-42110 Deposited data Python analysis code This paper GitHub; https://github.com/bernardosabatinilab/ Kamath_2025_Hunger Video tracking and dopamine photometry data This paper Harvard Dataverse; https://dataverse.harvard.edu/ dataset.xhtml?persistentId=doi:10.7910/DVN/ FJGSZ5 Experimental models: Organisms/strains Mouse: C57BL/6J Jackson Laboratory RRID: IMSR_JAX:000664 Mouse: AgRP-ires-Cre Jackson Laboratory RRID: IMSR_JAX:012899 Mouse: DAT-ires-Cre Jackson Laboratory RRID: IMSR_JAX:006660 Software and algorithms Motion Sequencing Wiltschko et al. 22 https://dattalab.github.io/moseq2-website/ index.html DeepLabCut Mathis et al. 25 https://github.com/DeepLabCut/DeepLabCut MATLAB Mathworks https://www.mathworks.com/; RRID:SCR_001622 Python https://www.python.org/downloads/; ScanImage (2012a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq ScanImage (2021a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq Custom MATLAB Scripts (fluorescence lifetime data acquisition) Lodder et al. 33 N/A Python https://www.python.org/ https://www.python.org/ (Continued on next page) Neuron 113, 1–14.e1–e8, December 3, 2025 e1 ..
Expressing:Article Title: Differentiation in the human urothelia is defined by distinct alternative polyadenylation.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies MCK10/DDR1 Invitrogen MA5-37672; RRID: AB_2897596 DVL3 Invitrogen PA5-115148; RRID: AB_2899784 LYPD3 Invitrogen PA5-111138; RRID: AB_2856548 DAPI Invitrogen D1306 Anti-rabbit HRP Southern Biotech #4050-1 Anti-mouse HRP Southern Biotech #1010-05 Biological samples Human ureter This paper Ureter Chemicals, peptides, and recombinant proteins Lipofectamine 3000 Invitrogen L3000015 SE Cell Line 96-well Nucleofector Kit (960 RCT) Lonza Bioscience V4SC-1960 Critical commercial assays Dual-Luciferase® Reporter Assay System Promega E1960 TSA+Cy3 Detection Kit Akoya Biosciences NEL744001KT TSA+Cy5 Detection Kit Akoya Biosciences NEL745001KT RNAscope Multiplex Fluorescent Detection Reagents v2 ACDbio 323110 RNAscope H2O2 and Protease Plus Reagents ACDbio 322330 RNAscope Target Retrieval Reagents ACDbio 32000 RNAscope Wash Buffer Reagents ACDbio 310091 Xenium Slides & Sample Prep Reagents 10x Genomics 1000460 Xenium Decoding Consumables 10x Genomics 1000487 Xenium Decoding Reagents 10x Genomics 1000461 Xenium Stand Alone Gene Expression Panel 10x Genomics #8QH2R6 Xenium Cell Segmentation Add-on Kit 10x Genomics 1000662 Deposited data Ureter scRNA-seq data Fink et al.3 GEO: GSE184111 Urothelial cell gene and peak count matrices This paper GEO: GSE262863 Experimental models: Cell lines .. HEK293T ATCC CRL-3216 Recombinant DNA pmirGLO Dual-Luciferase miRNA Target Expression Vector Promega E1330 AKIRIN1-P1 This paper Addgene #236018 AKIRIN1-P2 This paper Addgene #236019 ALDH5A1-P1 This paper Addgene #236020 ALDH5A1-P2 This paper Addgene #236021 DNM1L-P1 This paper Addgene #236022 DNM1L-P2 This paper Addgene #236023 (Continued on next page) Cell Reports 45, 116839, January 27, 2026 13 .. REAGENT or RESOURCE SOURCE IDENTIFIER DNM1L-P3 This paper Addgene #236024 DVL3-P1 This paper Addgene #236025 DVL3-P2 This paper Addgene #236026 ESYT2-P1 This paper Addgene #236027 ESYT2-P2 This paper Addgene #236028 HRH1-P1 This paper Addgene #236029 HRH1-P2 This paper Addgene #236030 ITGB6-P1 This paper Addgene #236031 ITGB6-P3 This paper Addgene #236032 IVNS1ABP-P1 This paper Addgene #236301 IVNS1ABP-P2 This paper Addgene #236302 IVNS1ABP-P3 This paper Addgene #236303 NKIRAS2-P1 This paper Addgene #236304 NKIRAS2-P2 This paper Addgene #236305 NOL12-P1 This paper Addgene #236306 NOL12-P2 This paper Addgene #236307 PLEKHA2-P1 This paper Addgene #236308 PLEKHA2-P2 This paper Addgene #236309 PMF1-P1 This paper Addgene #236310 PMF1-P2 This paper Addgene #236311 PTK6-P1 This paper Addgene #236312 PTK6-P2 This paper Addgene #236313 PTK6-P3 This paper Addgene #236314 RPS6KA3-P1 This paper Addgene #236315 RPS6KA3-P3 This paper Addgene #236316 SPINT1-P1 This paper Addgene #236317 SPINT1-P2 This paper Addgene #236318 SPINT1-P3 This paper Addgene #236319 TCTA-P1 This paper Addgene #236320 TCTA-P2 This paper Addgene #236321 C4orf19-P1 This paper Addgene #236322 C4orf19-P2 This paper Addgene #236323 C6orf89-P1 This paper Addgene #236324 C6orf89-P2 This paper Addgene #236325 C6orf89-P3 This paper Addgene #236326 DDR1-P1 This paper Addgene #236327 DDR1-P2 This paper Addgene #236328 METTL3-P1 This paper Addgene #237825 METTL3-P2 This paper Addgene #237826 MFSD11-P1 This paper Addgene #237827 MFSD11-P2 This paper Addgene #237828 NABP1-P1 This paper Addgene #237829 NABP1-P2 This paper Addgene #237830 NABP1-P3 This paper Addgene #237831 NAGA-P1 This paper Addgene #237832 NAGA-P2 This paper Addgene #237833 NCOA7-P1 This paper Addgene #237834 NCOA7-P2 This paper Addgene #237835 OPTN-P1 This paper Addgene #237836 (Continued on next page) 14 Cell Reports 45, 116839, January 27, 2026
Software:Article Title: Differentiation in the human urothelia is defined by distinct alternative polyadenylation.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER DNM1L-P3 This paper Addgene #236024 DVL3-P1 This paper Addgene #236025 DVL3-P2 This paper Addgene #236026 ESYT2-P1 This paper Addgene #236027 ESYT2-P2 This paper Addgene #236028 HRH1-P1 This paper Addgene #236029 HRH1-P2 This paper Addgene #236030 ITGB6-P1 This paper Addgene #236031 ITGB6-P3 This paper Addgene #236032 IVNS1ABP-P1 This paper Addgene #236301 IVNS1ABP-P2 This paper Addgene #236302 IVNS1ABP-P3 This paper Addgene #236303 NKIRAS2-P1 This paper Addgene #236304 NKIRAS2-P2 This paper Addgene #236305 NOL12-P1 This paper Addgene #236306 NOL12-P2 This paper Addgene #236307 PLEKHA2-P1 This paper Addgene #236308 PLEKHA2-P2 This paper Addgene #236309 PMF1-P1 This paper Addgene #236310 PMF1-P2 This paper Addgene #236311 PTK6-P1 This paper Addgene #236312 PTK6-P2 This paper Addgene #236313 PTK6-P3 This paper Addgene #236314 RPS6KA3-P1 This paper Addgene #236315 RPS6KA3-P3 This paper Addgene #236316 SPINT1-P1 This paper Addgene #236317 SPINT1-P2 This paper Addgene #236318 SPINT1-P3 This paper Addgene #236319 TCTA-P1 This paper Addgene #236320 TCTA-P2 This paper Addgene #236321 C4orf19-P1 This paper Addgene #236322 C4orf19-P2 This paper Addgene #236323 C6orf89-P1 This paper Addgene #236324 C6orf89-P2 This paper Addgene #236325 C6orf89-P3 This paper Addgene #236326 DDR1-P1 This paper Addgene #236327 DDR1-P2 This paper Addgene #236328 METTL3-P1 This paper Addgene #237825 METTL3-P2 This paper Addgene #237826 MFSD11-P1 This paper Addgene #237827 MFSD11-P2 This paper Addgene #237828 NABP1-P1 This paper Addgene #237829 NABP1-P2 This paper Addgene #237830 NABP1-P3 This paper Addgene #237831 NAGA-P1 This paper Addgene #237832 NAGA-P2 This paper Addgene #237833 NCOA7-P1 This paper Addgene #237834 NCOA7-P2 This paper Addgene #237835 OPTN-P1 This paper Addgene #237836 (Continued on next page) 14 Cell Reports 45, 116839, January 27, 2026 .. REAGENT or RESOURCE SOURCE IDENTIFIER OPTN-P2 This paper Addgene #237837 OSTF1-P1 This paper Addgene #237838 OSTF1-P2 This paper Addgene #237839 P4HA1-P1 This paper Addgene #237840 P4HA1-P2 This paper Addgene #237841 P4HA1-P3 This paper Addgene #237842 PEX11A-P1 This paper Addgene #237843 PEX11A-P2 This paper Addgene #237844 SF3A1-P1 This paper Addgene #237845 SF3A1-P2 This paper Addgene #237846 Software and algorithms R (4.2.1) CRAN https://cran.r-project.org/ apeglm (1.20.0) Zhu et al.39 https://bioconductor.org/packages/ release/bioc/html/apeglm.html argparser (0.7.1) CRAN https://cran.r-project.org/web/ packages/argparse/index.html Biostrings (2.66.0) Bioconductor https://bioconductor.org/packages/ release/bioc/html/Biostrings.html Cluster (2.1.4) CRAN https://cran.r-project.org/web/ packages/cluster/index.html data.table (1.14.8) CRAN https://cran.r-project.org/web/ packages/data.table/index.html DESeq2 (1.38.3) Love et al.40 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html DEXSeq (1.44.0) Anders et al.41 https://bioconductor.org/packages/ release/bioc/html/DEXSeq.html dplyr (1.1.3) CRAN https://cran.r-project.org/web/ packages/dplyr/index.html factoextra (1.0.7) CRAN https://cran.r-project.org/web/ packages/factoextra/index.html GenomicRanges 1.50.2) Lawrence et al.42 https://bioconductor.org/packages/ release/bioc/html/GenomicRanges.html ggplot2 (3.5.0) CRAN https://cran.r-project.org/web/ packages/ggplot2/index.html Goldmine (1.0.0) Bhasin et al.43 https://github.com/jeffbhasin/goldmine/ gtools (3.9.4) CRAN https://github.com/r-gregmisc/gtools magrittr (2.0.3) CRAN https://cran.r-project.org/web/ packages/magrittr/index.html Parallel (4.2.1) CRAN https://cran.r-project.org/ pheatmap (1.0.12) CRAN https://cran.r-project.org/web/ packages/pheatmap/index.html Reshape (0.8.9) CRAN https://cran.r-project.org/web/ packages/reshape/index.html Rsubread (2.12.3) Liao et al.44 https://bioconductor.org/packages/ release/bioc/html/Rsubread.html rtracklayer (1.58.0) Lawrence et al.45 https://www.bioconductor.org/packages/ release/bioc/html/rtracklayer.html Seurat (5.0.3) Satija et al.46 https://cran.r-project.org/web/ packages/Seurat/index.html stringr (1.5.1) CRAN https://cran.r-project.org/web/ packages/stringr/index.html (Continued on next page) Cell Reports 45, 116839, January 27, 2026 15 .. REAGENT or RESOURCE SOURCE IDENTIFIER tibble (3.2.1) CRAN https://cran.r-project.org/web/ packages/tibble/index.html tidyr (1.3.0) CRAN https://cran.r-project.org/web/ packages/tidyr/index.html MACS2 (2.2.8) Zhang et al.47 https://github.com/macs3-project/MACS bamCoverage (3.5.3) Ramirez et al.48 https://deeptools.readthedocs.io/en/ develop/content/tools/bamCoverage.html bedGraphToBigWig (4.0.0) UCSC utilities https://hgdownload.soe.ucsc.edu/admin/ exe/linux.x86_64.v369/bedGraphToBigWig bedToBigBed (2.7.0) UCSC utilities https://hgdownload.soe.ucsc.edu/admin/ exe/linux.x86_64.v369/bedToBigBed bedtools (2.30.0) Quinlan and Hall49 https://bedtools.readthedocs.io/en/latest/ bigWigToBedGraph UCSC utilities https://hgdownload.soe.ucsc.edu/admin/ exe/linux.x86_64.v369/bigWigToBedGraph bowtie2 (2.5.2) Langmead and Sallzberg50 https://bowtie-bio.sourceforge. net/bowtie2/index.shtml cellranger (7.1.0) 10X Genomics https://support.10xgenomics.com/ single-cell-gene-expression/software/ pipelines/7.1/release-notes perl (5.22.1) Perl https://www.perl.org/ picard (2.23.8) RRID:SCR_006525 https://broadinstitute.github.io/picard/ samtools (1.1.0) Danecek et al.51 https://www.htslib.org/ subset-bam (1.1.0) 10X Genomics https://github.com/10XGenomics/ subset-bam umi_tools (1.1.4) Smith et al.52 https://github.com/CGATOxford/UMI-tools scPASU pipeline This paper https://github.com/ninhleba/scPASU_ pipeline/tree/v1.0.1; https://doi.org/10.
Virus:Article Title: Hunger modulates exploration through suppression of dopamine signaling in the tail of the striatum.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal anti-dsRed Takara RRID: AB_10013483; Cat. #632496 Chicken polyclonal anti-GFP Abcam RRID: AB_300798; Cat. #13970 Goat polyclonal anti-AgRP Thermofisher Scientific RRID: AB_2608453; Cat. #PA5-47831 Mouse anti-tyrosine hydroxylase Immunostar RRID: AB_572268; Cat. #22941 Bacterial and virus strains AAV9-CAG-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8mut This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-hSyn-mCherry Deisseroth Lab RRID: Addgene_114472; #114472-AAV8 AAV9-hSyn-DIO-hM3D(G)q-mCherry Addgene RRID: Addgene_44361; #44361-AAV9 AAV8-hSyn-DIO-hM4D(G)i-mCherry Addgene RRID: Addgene_44362; #44362-AAV8 AAV8-hSyn-DIO-mCherry Addgene RRID: Addgene_50459; #50459-AAV8 AAV8-hSyn-FLEX-TC66T-P2A-EGFP-P2A-N2CG This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-Ef1a-FLEX-TVA-EGFP Salk Institute 26198 pAAV-nEF-Con/Foff 2.0-ChRmine-oScarlet Addgene RRID: Addgene_137161; #137161 pAAV-hSyn-FLEX-10xmyc Capelli et al. 70 N/A pAAV-hSyn-FLEX-H2B-GFP Ruder et al. 71 N/A pAAV-CAG-Cre Yang et al. 72 N/A EnvA-pseudotyped CVS-N2C-RbV-ΔG-H2btdTomato Janelia Viral Core N/A Chemicals, peptides, and recombinant proteins Deschloroclozapine MedChem Express Cat. #HY-42110 Deposited data Python analysis code This paper GitHub; https://github.com/bernardosabatinilab/ Kamath_2025_Hunger Video tracking and dopamine photometry data This paper Harvard Dataverse; https://dataverse.harvard.edu/ dataset.xhtml?persistentId=doi:10.7910/DVN/ FJGSZ5 Experimental models: Organisms/strains Mouse: C57BL/6J Jackson Laboratory RRID: IMSR_JAX:000664 Mouse: AgRP-ires-Cre Jackson Laboratory RRID: IMSR_JAX:012899 Mouse: DAT-ires-Cre Jackson Laboratory RRID: IMSR_JAX:006660 Software and algorithms Motion Sequencing Wiltschko et al. 22 https://dattalab.github.io/moseq2-website/ index.html DeepLabCut Mathis et al. 25 https://github.com/DeepLabCut/DeepLabCut MATLAB Mathworks https://www.mathworks.com/; RRID:SCR_001622 Python https://www.python.org/downloads/; ScanImage (2012a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq ScanImage (2021a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq Custom MATLAB Scripts (fluorescence lifetime data acquisition) Lodder et al. 33 N/A Python https://www.python.org/ https://www.python.org/ (Continued on next page) Neuron 113, 1–14.e1–e8, December 3, 2025 e1 ..
Bioprocessing:Article Title: Hunger modulates exploration through suppression of dopamine signaling in the tail of the striatum.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal anti-dsRed Takara RRID: AB_10013483; Cat. #632496 Chicken polyclonal anti-GFP Abcam RRID: AB_300798; Cat. #13970 Goat polyclonal anti-AgRP Thermofisher Scientific RRID: AB_2608453; Cat. #PA5-47831 Mouse anti-tyrosine hydroxylase Immunostar RRID: AB_572268; Cat. #22941 Bacterial and virus strains AAV9-CAG-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8mut This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-hSyn-mCherry Deisseroth Lab RRID: Addgene_114472; #114472-AAV8 AAV9-hSyn-DIO-hM3D(G)q-mCherry Addgene RRID: Addgene_44361; #44361-AAV9 AAV8-hSyn-DIO-hM4D(G)i-mCherry Addgene RRID: Addgene_44362; #44362-AAV8 AAV8-hSyn-DIO-mCherry Addgene RRID: Addgene_50459; #50459-AAV8 AAV8-hSyn-FLEX-TC66T-P2A-EGFP-P2A-N2CG This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-Ef1a-FLEX-TVA-EGFP Salk Institute 26198 pAAV-nEF-Con/Foff 2.0-ChRmine-oScarlet Addgene RRID: Addgene_137161; #137161 pAAV-hSyn-FLEX-10xmyc Capelli et al. 70 N/A pAAV-hSyn-FLEX-H2B-GFP Ruder et al. 71 N/A pAAV-CAG-Cre Yang et al. 72 N/A EnvA-pseudotyped CVS-N2C-RbV-ΔG-H2btdTomato Janelia Viral Core N/A Chemicals, peptides, and recombinant proteins Deschloroclozapine MedChem Express Cat. #HY-42110 Deposited data Python analysis code This paper GitHub; https://github.com/bernardosabatinilab/ Kamath_2025_Hunger Video tracking and dopamine photometry data This paper Harvard Dataverse; https://dataverse.harvard.edu/ dataset.xhtml?persistentId=doi:10.7910/DVN/ FJGSZ5 Experimental models: Organisms/strains Mouse: C57BL/6J Jackson Laboratory RRID: IMSR_JAX:000664 Mouse: AgRP-ires-Cre Jackson Laboratory RRID: IMSR_JAX:012899 Mouse: DAT-ires-Cre Jackson Laboratory RRID: IMSR_JAX:006660 Software and algorithms Motion Sequencing Wiltschko et al. 22 https://dattalab.github.io/moseq2-website/ index.html DeepLabCut Mathis et al. 25 https://github.com/DeepLabCut/DeepLabCut MATLAB Mathworks https://www.mathworks.com/; RRID:SCR_001622 Python https://www.python.org/downloads/; ScanImage (2012a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq ScanImage (2021a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq Custom MATLAB Scripts (fluorescence lifetime data acquisition) Lodder et al. 33 N/A Python https://www.python.org/ https://www.python.org/ (Continued on next page) Neuron 113, 1–14.e1–e8, December 3, 2025 e1 ..
Sequencing:Article Title: Hunger modulates exploration through suppression of dopamine signaling in the tail of the striatum.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal anti-dsRed Takara RRID: AB_10013483; Cat. #632496 Chicken polyclonal anti-GFP Abcam RRID: AB_300798; Cat. #13970 Goat polyclonal anti-AgRP Thermofisher Scientific RRID: AB_2608453; Cat. #PA5-47831 Mouse anti-tyrosine hydroxylase Immunostar RRID: AB_572268; Cat. #22941 Bacterial and virus strains AAV9-CAG-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8mut This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-hSyn-mCherry Deisseroth Lab RRID: Addgene_114472; #114472-AAV8 AAV9-hSyn-DIO-hM3D(G)q-mCherry Addgene RRID: Addgene_44361; #44361-AAV9 AAV8-hSyn-DIO-hM4D(G)i-mCherry Addgene RRID: Addgene_44362; #44362-AAV8 AAV8-hSyn-DIO-mCherry Addgene RRID: Addgene_50459; #50459-AAV8 AAV8-hSyn-FLEX-TC66T-P2A-EGFP-P2A-N2CG This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-Ef1a-FLEX-TVA-EGFP Salk Institute 26198 pAAV-nEF-Con/Foff 2.0-ChRmine-oScarlet Addgene RRID: Addgene_137161; #137161 pAAV-hSyn-FLEX-10xmyc Capelli et al. 70 N/A pAAV-hSyn-FLEX-H2B-GFP Ruder et al. 71 N/A pAAV-CAG-Cre Yang et al. 72 N/A EnvA-pseudotyped CVS-N2C-RbV-ΔG-H2btdTomato Janelia Viral Core N/A Chemicals, peptides, and recombinant proteins Deschloroclozapine MedChem Express Cat. #HY-42110 Deposited data Python analysis code This paper GitHub; https://github.com/bernardosabatinilab/ Kamath_2025_Hunger Video tracking and dopamine photometry data This paper Harvard Dataverse; https://dataverse.harvard.edu/ dataset.xhtml?persistentId=doi:10.7910/DVN/ FJGSZ5 Experimental models: Organisms/strains Mouse: C57BL/6J Jackson Laboratory RRID: IMSR_JAX:000664 Mouse: AgRP-ires-Cre Jackson Laboratory RRID: IMSR_JAX:012899 Mouse: DAT-ires-Cre Jackson Laboratory RRID: IMSR_JAX:006660 Software and algorithms Motion Sequencing Wiltschko et al. 22 https://dattalab.github.io/moseq2-website/ index.html DeepLabCut Mathis et al. 25 https://github.com/DeepLabCut/DeepLabCut MATLAB Mathworks https://www.mathworks.com/; RRID:SCR_001622 Python https://www.python.org/downloads/; ScanImage (2012a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq ScanImage (2021a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq Custom MATLAB Scripts (fluorescence lifetime data acquisition) Lodder et al. 33 N/A Python https://www.python.org/ https://www.python.org/ (Continued on next page) Neuron 113, 1–14.e1–e8, December 3, 2025 e1 ..
Fluorescence:Article Title: Hunger modulates exploration through suppression of dopamine signaling in the tail of the striatum.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Rabbit polyclonal anti-dsRed Takara RRID: AB_10013483; Cat. #632496 Chicken polyclonal anti-GFP Abcam RRID: AB_300798; Cat. #13970 Goat polyclonal anti-AgRP Thermofisher Scientific RRID: AB_2608453; Cat. #PA5-47831 Mouse anti-tyrosine hydroxylase Immunostar RRID: AB_572268; Cat. #22941 Bacterial and virus strains AAV9-CAG-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8 UNC Neurotools AAV in stock AAV9-hSyn-dLight3.8mut This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-hSyn-mCherry Deisseroth Lab RRID: Addgene_114472; #114472-AAV8 AAV9-hSyn-DIO-hM3D(G)q-mCherry Addgene RRID: Addgene_44361; #44361-AAV9 AAV8-hSyn-DIO-hM4D(G)i-mCherry Addgene RRID: Addgene_44362; #44362-AAV8 AAV8-hSyn-DIO-mCherry Addgene RRID: Addgene_50459; #50459-AAV8 AAV8-hSyn-FLEX-TC66T-P2A-EGFP-P2A-N2CG This paper Addgene; https://www.addgene.org/Bernardo_ Sabatini/ AAV8-Ef1a-FLEX-TVA-EGFP Salk Institute 26198 pAAV-nEF-Con/Foff 2.0-ChRmine-oScarlet Addgene RRID: Addgene_137161; #137161 pAAV-hSyn-FLEX-10xmyc Capelli et al. 70 N/A pAAV-hSyn-FLEX-H2B-GFP Ruder et al. 71 N/A pAAV-CAG-Cre Yang et al. 72 N/A EnvA-pseudotyped CVS-N2C-RbV-ΔG-H2btdTomato Janelia Viral Core N/A Chemicals, peptides, and recombinant proteins Deschloroclozapine MedChem Express Cat. #HY-42110 Deposited data Python analysis code This paper GitHub; https://github.com/bernardosabatinilab/ Kamath_2025_Hunger Video tracking and dopamine photometry data This paper Harvard Dataverse; https://dataverse.harvard.edu/ dataset.xhtml?persistentId=doi:10.7910/DVN/ FJGSZ5 Experimental models: Organisms/strains Mouse: C57BL/6J Jackson Laboratory RRID: IMSR_JAX:000664 Mouse: AgRP-ires-Cre Jackson Laboratory RRID: IMSR_JAX:012899 Mouse: DAT-ires-Cre Jackson Laboratory RRID: IMSR_JAX:006660 Software and algorithms Motion Sequencing Wiltschko et al. 22 https://dattalab.github.io/moseq2-website/ index.html DeepLabCut Mathis et al. 25 https://github.com/DeepLabCut/DeepLabCut MATLAB Mathworks https://www.mathworks.com/; RRID:SCR_001622 Python https://www.python.org/downloads/; ScanImage (2012a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq ScanImage (2021a version) Bernardo Sabatini https://github.com/bernardosabatini/SabalabAcq Custom MATLAB Scripts (fluorescence lifetime data acquisition) Lodder et al. 33 N/A Python https://www.python.org/ https://www.python.org/ (Continued on next page) Neuron 113, 1–14.e1–e8, December 3, 2025 e1 ..
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